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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5898077 chr9:72002911 T/TGTTATA SRPK3 chrX:153041867-153051187:+ -0.35 -5.89 7.19E-9 Box Plot
THCA rs58989259 chr8:10847116 AG/A SGK223 chr8:8175258-8244008:- 0.41 7.02 7.7E-12 Box Plot
THCA rs5899324 chr9:100533317 ACT/A BMPR1A chr10:88516358-88692595:+ -0.24 -6.18 1.34E-9 Box Plot
THCA rs5899324 chr9:100533317 ACT/A CLDN2 chrX:106143394-106174091:+ 0.26 6.01 3.68E-9 Box Plot
THCA rs5899324 chr9:100533317 ACT/A EPDR1 chr7:37723446-37991543:+ 0.32 7.08 5.14E-12 Box Plot
THCA rs5899324 chr9:100533317 ACT/A GGT5 chr22:24615622-24641110:- 0.27 6.26 8.41E-10 Box Plot
THCA rs5899324 chr9:100533317 ACT/A LRRC42 chr1:54411750-54433841:+ -0.24 -6.16 1.57E-9 Box Plot
THCA rs5899324 chr9:100533317 ACT/A NKX6-1 chr4:85413140-85419603:- 0.5 8.52 2.02E-16 Box Plot
THCA rs58999675 chr2:101075324 G/C LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs59018417 chr6:170820627 C/A NCRNA00115 chr1:761587-762902:- 0.6 6.7 5.85E-11 Box Plot
THCA rs59049305 chr2:101088721 TGAGAA/T LOC285359 chr3:101431278-101432259:+ 0.36 6.91 1.51E-11 Box Plot
THCA rs59057359 chr5:46031926 G/A LOC647121 chr1:121260910-121313686:+ 0.36 7.53 2.63E-13 Box Plot
THCA rs59074088 chr6:27792604 TTGTC/T BTN3A2 chr6:26365387-26378548:+ -0.51 -8.9 1.17E-17 Box Plot
THCA rs59074088 chr6:27792604 TTGTC/T ZFP57 chr6:29640169-29648887:- 0.59 7.08 5.33E-12 Box Plot
THCA rs59098568 chr14:66718144 T/G ATP6V1D chr14:67761088-67826982:- 0.31 6.42 3.2E-10 Box Plot